Publications

1. Dobson, L, Tusnády, GE and Tompa, P (2025) Regularly updated benchmark sets for statistically correct evaluations of AlphaFold applications. Brief Bioinform 26: .

2. Fichó, E, Pancsa, R, Magyar, C, Kalman, ZE, Schád, É, Németh, BZ, Simon, I, Dobson, L and Tusnády, GE (2025) MFIB 2.0: a major update of the database of protein complexes formed by mutual folding of the constituting protein chains. Nucleic Acids Res 53: D487-D494.

3. Zeke, A, Alexa, A and Reményi, A (2024) Discovery and Characterization of Linear Motif Mediated Protein-Protein Complexes. Adv Exp Med Biol 3234: 59-71.

4. Dobson, L, Gerdán, C, Tusnády, S, Szekeres, LI, Kuffa, KR, Langó, T, Zeke, A and Tusnády, GE (2024) UniTmp: unified resources for transmembrane proteins. Nucleic Acids Res 52: D572-D578.

5. Kumar, M, Michael, S, Alvarado-Valverde, J, Zeke, A, Lazar, T, Glavina, J, Nagy-Kanta, E, Donagh, JM, Kalman, ZE, Pascarelli, S, Palopoli, N, Dobson, L, Suarez, CF, van Roey, K, Krystkowiak, I, Griffin, JE, Nagpal, A, Bhardwaj, R, Diella, F, Mészáros, B, Dean, K, Davey, NE, Pancsa, R, Chemes, LB and Gibson, TJ (2024) ELM-the Eukaryotic Linear Motif resource-2024 update. Nucleic Acids Res 52: D442-D455.

6. Zeke, A, Gibson, TJ and Dobson, L (2024) Linear motifs regulating protein secretion, sorting and autophagy in Leishmania parasites are diverged with respect to their host equivalents. PLoS Comput Biol 20: e1011902.

7. Aspromonte, MC, Nugnes, MV, Quaglia, F, Bouharoua, A, DisProt, C, Tosatto, SC and Piovesan, D (2024) DisProt in 2024: improving function annotation of intrinsically disordered proteins. Nucleic Acids Res 52: D434-D441.

8. Tóth, S, Szlávik, MF, Mandel, R, Fekecs, F, Tusnády, GE, Vajda, F, Varga, N, Apáti, Á, Bényei, A, Paczal, A, Kotschy, A and Szakács, G (2024) Synthesis and Systematic Investigation of Lepidiline A and Its Gold(I), Silver(I), and Copper(I) Complexes Using In Vitro Cancer Models and Multipotent Stem Cells. ACS Omega 9: 32226-32234.

9. Amin, HM, Szabo, B, Abukhairan, R, Zeke, A, Kardos, J, Schad, É and Tantos, Á (2023) In Vivo and In Vitro Characterization of the RNA Binding Capacity of SETD1A (KMT2F). Int J Mol Sci 24: .

10. Jambrich, MA, Tusnády, GE and Dobson, L (2023) How AlphaFold2 shaped the structural coverage of the human transmembrane proteome. Sci Rep 13: 20283.