Publications

21. Tálas, A, Huszár, K, Kulcsár, PI, Varga, JK, Varga, É, Tóth, E, Welker, Z, Erdős, G, Pach, PF, Welker, Á, Györgypál, Z, Tusnády, GE and Welker, E (2021) A method for characterizing Cas9 variants via a one-million target sequence library of self-targeting sgRNAs. Nucleic Acids Res 49: e31.

22. Zeke, A, Dobson, L, Szekeres, LI, Langó, T and Tusnády, GE (2021) PolarProtDb: A Database of Transmembrane and Secreted Proteins showing Apical-Basal Polarity. J Mol Biol 433: 166705.

23. Czimer, D, Porok, K, Csete, D, Gyüre, Z, Lavró, V, Fülöp, K, Chen, Z, Gyergyák, H, Tusnády, GE, Burgess, SM, Mócsai, A, Váradi, A and Varga, M (2021) A New Zebrafish Model for Pseudoxanthoma Elasticum. Front Cell Dev Biol 9: 628699.

24. Dobson, L, Zeke, A and Tusnády, GE (2021) PolarProtPred: predicting apical and basolateral localization of transmembrane proteins using putative short linear motifs and deep learning. Bioinformatics 37: 4328-4335.

25. Jarnot, P, Ziemska-Legiecka, J, Dobson, L, Merski, M, Mier, P, Andrade-Navarro, MA, Hancock, JM, Dosztányi, Z, Paladin, L, Necci, M, Piovesan, D, Tosatto, SC, Promponas, VJ, Grynberg, M and Gruca, A (2020) PlaToLoCo: the first web meta-server for visualization and annotation of low complexity regions in proteins. Nucleic Acids Res 48: W77-W84.

26. Farkas, B, Csizmadia, G, Katona, E, Tusnády, GE and Hegedűs, T (2020) MemBlob database and server for identifying transmembrane regions using cryo-EM maps. Bioinformatics 36: 2595-2598.

27. Csizmadia, G, Farkas, B, Katona, E, Tusnády, GE and Hegedűs, T (2020) Using MemBlob to Analyze Transmembrane Regions Based on Cryo-EM Maps. Methods Mol Biol 2112: 123-130.

28. Langó, T, Pataki, ZG, Turiák, L, Ács, A, Varga, JK, Várady, G, Kucsma, N, Drahos, L and Tusnády, GE (2020) Partial proteolysis improves the identification of the extracellular segments of transmembrane proteins by surface biotinylation. Sci Rep 10: 8880.

29. Bakos, É, Tusnády, GE, Német, O, Patik, I, Magyar, C, Németh, K, Kele, P and Özvegy-Laczka, C (2020) Synergistic transport of a fluorescent coumarin probe marks coumarins as pharmacological modulators of Organic anion-transporting polypeptide, OATP3A1. Biochem Pharmacol 182: 114250.

30. Kalman, ZE, Mészáros, B, Gáspári, Z and Dobson, L (2020) Distribution of disease-causing germline mutations in coiled-coils implies an important role of their N-terminal region. Sci Rep 10: 17333.