Protein Bioinformatics Research Group

Publications

21. Zeke, A, Takács, T, Sok, P, Németh, K, Kirsch, K, Egri, P, Póti, ÁL, Bento, I, Tusnády, GE and Reményi, A (2022) Structural insights into the pSer/pThr dependent regulation of the SHP2 tyrosine phosphatase in insulin and CD28 signaling. Nat Commun 13: 5439.
22. Quaglia, F, Mészáros, B, Salladini, E, Hatos, A, Pancsa, R, Chemes, LB, Pajkos, M, Lazar, T, Peña-Díaz, S, Santos, K, Santos, J, Ács, V, Farahi, N, Fichó, E, Aspromonte, MC, Bassot, C, Chasapi, A, Davey, NE, Davidović, R, Dobson, L, Elofsson, A, Erdős, G, Gaudet, P, Giglio, M, Glavina, J, Iserte, J, Iglesias, V, Kálmán, ZE, Lambrughi, M, Leonardi, E, Longhi, S, Macedo-Ribeiro, S, Maiani, E, Marchetti, J, Marino-Buslje, C, Mészáros, A, Monzon, AM, Minervini, G, Nadendla, S, Nilsson, JF, Novotný, M, Ouzounis, CA, Palopoli, N, Papaleo, N, Papaleo, E, Pereira, PJ, Pozzati, G, Promponas, VJ, Pujols, J, Rocha, AC, Salas, M, Sawicki, LR, Schad, É, Shenoy, A, Szaniszló, T, Tsirigos, KD, Veljkovic, N, Parisi, G, Ventura, S, Dosztányi, Z, Tompa, P, Tosatto, SC and Piovesan, D (2022) DisProt in 2022: improved quality and accessibility of protein intrinsic disorder annotation. Nucleic Acids Res 50: D480-D487.
23. Kumar, M, Michael, S, Alvarado-Valverde, J, Mészáros, B, Sámano-Sánchez, H, Zeke, A, Dobson, L, Lazar, T, Örd, M, Nagpal, A, Farahi, N, Käser, M, Kraleti, R, Davey, NE, Pancsa, R, Chemes, LB and Gibson, TJ (2022) The Eukaryotic Linear Motif resource: 2022 release. Nucleic Acids Res 50: D497-D508.
24. Kalman, ZE, Dudola, D, Mészáros, B, Gáspári, Z and Dobson, L (2022) PSINDB: the postsynaptic protein-protein interaction database. Database (Oxford) 2022: .
25. Langó, T, Kuffa, KR, Tóth, G, Turiák, L, Drahos, L and Tusnády, GE (2022) Comprehensive Discovery of the Accessible Primary Amino Group-Containing Segments from Cell Surface Proteins by Fine-Tuning a High-Throughput Biotinylation Method. Int J Mol Sci 24: .
26. Bakos, É, Német, O, Kucsma, N, Tőkési, N, Stieger, B, Rushing, E, Tőkés, AM, Kele, P, Tusnády, GE and Özvegy-Laczka, C (2022) Cloning and characterization of a novel functional organic anion transporting polypeptide 3A1 isoform highly expressed in the human brain and testis. Front Pharmacol 13: 958023.
27. Tálas, A, Huszár, K, Kulcsár, PI, Varga, JK, Varga, É, Tóth, E, Welker, Z, Erdős, G, Pach, PF, Welker, Á, Györgypál, Z, Tusnády, GE and Welker, E (2021) A method for characterizing Cas9 variants via a one-million target sequence library of self-targeting sgRNAs. Nucleic Acids Res 49: e31.
28. Dobson, L and Tusnády, GE (2021) MemDis: Predicting Disordered Regions in Transmembrane Proteins. Sci Rep 22: .
[ PubMed ] [ DOI ] [Research topic(s): tmidr]
29. Kozák, E, Szikora, B, Iliás, A, Jani, PK, Hegyi, Z, Matula, Z, Dedinszki, D, Tőkési, N, Fülöp, K, Pomozi, V, Várady, G, Bakos, É, Tusnády, GE, Kacskovics, I and Váradi, A (2021) Creation of the first monoclonal antibody recognizing an extracellular epitope of hABCC6. FEBS Lett 595: 789-798.
30. Dobson, L, Zeke, A and Tusnády, GE (2021) PolarProtPred: predicting apical and basolateral localization of transmembrane proteins using putative short linear motifs and deep learning. Bioinformatics 37: 4328-4335.
[ PubMed ] [ DOI ] [Research topic(s): servers]

News

2017-01-11 - Paper accepted
2016-11-17 - Scientific Students' Association first prize
2016-10-06 - TSTMP
2016-08-23 - ÚNKP
2016-04-14 - Paper published